Abhishek Sohni, PhD
Senior Scientist @ Xaira Therapeutics
About
I am a Molecular/Cell Biologist with a Ph.D. in Biomedical Science in Molecular and Stem Cell Medicine with expertise in Stem Cell and Epigenetics. Key areas of expertise include: 🔷 Molecular biology – Technical and hands on experience with Gene editing, silencing and knockdown (CRISPR, sh/siRNA, transposon, viral vectors), cloning, RT-PCR, qPCR 🔷 Cell biology – Cell/tissue culture, isolation/derivation of Stem Cells, culture of primary and transformed cell lines including cancer cell lines 🔷 Next Generation Sequencing (NGS) – Library preparation, data mining/analysis, RNA-Seq, smallRNA-seq, ChIP-seq, Whole Genome Bisulfite Sequencing & single cell RNA-seq (10x genomics) 🔷 Project Management
United States
San Francisco Bay Area
Research
Biology, DNA, PCR, qPCR, Molecular Cloning, Cell, Cell Culture, Cell Biology, Molecular Biology, Lifesciences, Biochemistry, Microscopy, Fluorescence Microscopy, Immunohistochemistry, Real-Time Polymerase Chain Reaction (qPCR), genome editing CRISPR, Epigenetics, RNASeq, Ingenuity Pathway Analysis, single cell RNA-seq
Experience

Scientist I, Functional Genomics
South San Francisco, California, United States
* 𝐀𝐬𝐬𝐚𝐲 𝐃𝐞𝐯𝐞𝐥𝐨𝐩𝐦𝐞𝐧𝐭 𝐚𝐧𝐝 𝐓𝐚𝐫𝐠𝐞𝐭 𝐃𝐢𝐬𝐜𝐨𝐯𝐞𝐫𝐲 • 𝐶𝑅𝐼𝑆𝑃𝑅-𝑠𝑐𝑟𝑒𝑒𝑛: Designed high through-put CRISPR perturbation and Single cell based pooled screening assay to associate disease relevant GWAS variants to potential targets in different cellular context. • CRISPRi screen enabled hypothesis generation for multiple disease relevant GWAS variants to candidate genes for genetics based drug discovery research in immune related disease areas. • Established robust R based QC and differential gene expression analysis pipeline providing a discovery rate of >25%. • 𝐴𝑟𝑟𝑎𝑦𝑒𝑑 𝑆𝑐𝑟𝑒𝑒𝑛: Established Array based DRUG-seq assay for functional and transcriptomic read out in an immunology indication. * 𝐒𝐭𝐞𝐦 𝐜𝐞𝐥𝐥 𝐚𝐬 𝐢𝐧 𝐯𝐢𝐭𝐫𝐨 𝐦𝐨𝐝𝐞𝐥𝐬 𝐢𝐧 𝐝𝐫𝐮𝐠 𝐝𝐢𝐬𝐜𝐨𝐯𝐞𝐫𝐲 • Stem cell expertise in establishment of MSC as differentiation assay as 𝑖𝑛 𝑣𝑖𝑡𝑟𝑜 model for functional characterization of targets. • Mentored a Postdoc scholar in establishing 3D organoids as an 𝑖𝑛 𝑣𝑖𝑡𝑟𝑜 model for genetics based drug discovery for inflammatory bowel disease. * 𝐓𝐚𝐫𝐠𝐞𝐭 𝐏𝐫𝐢𝐨𝐫𝐢𝐭𝐢𝐳𝐚𝐭𝐢𝐨𝐧 𝐚𝐧𝐝 𝐂𝐡𝐚𝐫𝐚𝐜𝐭𝐞𝐫𝐢𝐳𝐚𝐭𝐢𝐨𝐧 • Employed in-house and public single cell and multi-omics datasets for characterization and prioritization of candidates for cardiometabolic and immuno-oncology workstream. * 𝐌𝐞𝐜𝐡𝐚𝐧𝐢𝐬𝐦 𝐨𝐟 𝐀𝐜𝐭𝐢𝐨𝐧 (𝐌𝐎𝐀) • Led the functional genomics effort in collaboration with in vivo, immunology, flow core and computational biology teams to evaluate the MOA using mouse surrogate of the lead clinical molecule in an in vivo syngeneic mouse tumor model.
Abhishek Sohni, PhD's Contact Information
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