Xiaoyu Lu
Postdoctoral Researcher @ Oregon Health & Science University
About
Xiaoyu Lu is currently a Scientist in Systems Biology & Statistical Learning at BMS. He is an expert bioinformatician with 8+ years’ of experience in developing tailored computational approaches for target identification and drug discovery in pharmaceutical and academic settings. Solid background in computational biology, machine-learning and statistical-modeling. Passionate to leverage biomedical knowledge, computational innovation and data-driven insights to accelerate precision medicine. Strong track record of high-impact publications. Proven as a fast learner, good team worker and strong problem solver.
United States
San Diego
Research
Machine Learning, Statistical Modeling, Computational Biology, Bioinformatics, Drug Discovery, Python, R, Linux, Adobe Illustrator, Data Science, Project Management, SQL
Experience

Scientist, Systems Biology & Statistical Learning
San Diego, California, United States
• Developed machine learning and statistical inference approaches to identify critical regulators of transcriptional patient states from multi-modal real-world patient molecular profiles, which contributing to patient selection and clinical strategy for BMS on-going programs. • Contributed to the initiation of 5+ data driven novel targets in selected oncology indications, driving the computational strategy and analysis in cross-functional teams. • Designed genetic validation experiments in relevant patient derived models, integrated orthogonal lines of evidence, utilized computational innovations to accelerate target prioritization 5-fold and delivered 3+ target validation data packages for discovery programs.

Research Assistant
Indianapolis
• Advanced machine learning and statistical model development in bioinformatics • Multi-omics data investigation and inference • User friendly R Shiny interface development. • Work as a reviewer for multiple journal and conferences, e.g. Bioinformatics, PLOS ONE, KDD, RECOMB and BIBM.

Single Cell Sequencing/Spatial Transcriptomics Co-Op
Boston, Massachusetts, United States
• Hands-on analysis of internal single cell sequencing and spatial transcriptomics datasets. • Develop new computational methods and pipelines for spatial transcriptomics data. • Discussing results with diverse groups to pursue data driven characterization for pathogenesis and MoA in Oncology and CNS diseases.

Bioinformatics Internship
Redwood City, California, United States
• Identified gene signatures which are highly correlated in tumor microenvironment and correspond to glycolysis levels in vitro and in vivo. • Estimate glycolysis levels in the TME using transcriptomic data.
Education
Xiaoyu Lu's Contact Information
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