Erle Holgersen
Principal Scientist @ Moonwalk Biosciences
United States
San Francisco
Biotechnology
Software Development, R, Data Analysis, Research, Data Visualization, Bioinformatics, Statistics, Biostatistics, Machine Learning, Python, SQL, Unix, Docker, Git, Teaching, Survival Analysis, Computational Biology, Cloud Computing, TensorFlow, Google Cloud Platform (GCP)
Experience
Principal Scientist
Moonwalk Biosciences
San Francisco Bay Area
Staff Scientist
Moonwalk Biosciences
San Francisco Bay Area
Associate Director, Applied Data Science / Lead Scientist
Deep Genomics
Toronto, Ontario, Canada
Built and led data science team
(Senior) Research Scientist
Deep Genomics
Toronto, Ontario, Canada
Bioinformatician
Deep Genomics
Toronto, Ontario, Canada
Statistician
The Institute of Cancer Research
Worked within the Breast Cancer Bioinformatics Team and collaborated with 12 wet lab research groups. I wrote pipelines from scratch (amplicon sequencing, capture Hi-C) and handled end-to-end bioinformatics analyses of multiple wet lab experiments, including RNA-seq and exome sequencing.
Research Assistant
University of Toronto
Toronto, Ontario, Canada
Short-term project to enhance and refactor an NLP tool for extracting protest event data from news articles. Built with Python, scikit-learn, the Stanford NER tagger, and Docker. Website: mpeds.github.io Code: github.com/MPEDS/mpeds
Biostatistics Intern
Ontario Institute for Cancer Research
Toronto, Ontario, Canada
Eight-month internship funded by the Biostatistics Training Initiative. I worked in a large bioinformatics lab and collaborated with bioinformaticians, software engineers, and biologists on statistical analyses of genomics data.
Teaching Assistant
University of Waterloo
Ontario, Canada
Education
University of Waterloo
Statistics
Trinity College Dublin
Mathematics
Erle Holgersen's Contact Information
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