Ankitha Thyagarajan
Intern @ Venkataeswara Hospitals
About
Biomedical Engineering graduate with a Master’s in Bioinformatics, experienced in genomic and proteomic analysis, healthcare data research, and high-performance computing (Linux, Blue Pebble HPC). Proficient in Python and R for biomedical data analysis, population genetics, and applied healthcare research. Passionate about leveraging computational biology and data science to drive innovation in biotechnology and healthcare. Skills : Technical & Computational: Bioinformatics data analysis Genomic data analysis Proteomics data analysis Population genetics Demographic modeling Biomedical data analysis Programming & Tools: Python (biomedical & genomic analysis) R (statistical analysis, modeling) 3D protein structural analysis (PyMol , Alphafold) Linux environments High-Performance Computing (HPC) Blue Pebble HPC Bioinformatics pipelines & tools
United Kingdom
Bristol
Biotechnology
Pymol, Alphafold, Deep Learning, Image Processing, Image Segmentation, Biological Engineering, Medical Records, BLAST, Dadi, High Performance Computing (HPC), Python (Programming Language), R (Programming Language), C++
Experience

Intern
Synkromax Biotech Pvt Ltd
Chennai, Tamil Nadu, India
Training on nano scaffold fabrication techniques and general microbiology
Education

Bioinformatics
Thesis : Estimating Historical Migration Rates and Population Sizes from Whole Genome Data Using Scottish Wildcats This is a research project focused on inferring demographic history from genomic data. The study used dadi (Diffusion Approximation for Demographic Inference) to analyze genetic data from two populations, Scottish wildcats and domestic cats, in order to estimate key demographic parameters such as historical migration rates , divergence time and effective population sizes. The analysis was based on joint site frequency spectrum (JSFS) data generated from whole genome sequences. Three demographic models were implemented and compared : the Isolation with Migration model, Bottleneck model, and Fractional Split with Isolation with Migration model. HPC BluePebble was utilized to generate chromosome-specific text files required for the analysis. This study demonstrates the application of population genomics and computational tools to study species divergence and gene flow.

Biomedical Engineering
Final Year Project: Automated Skin Disease Detection Using Deep Learning This project focuses on the classification of nine different skin diseases using deep learning techniques. The diseases included are Actinic Keratosis, Basal Cell Carcinoma, Dermatofibroma, Melanoma, Nevus, Pigmented Benign Keratosis, Seborrheic Keratosis, Squamous Cell Carcinoma, and Vascular Lesion. The system was developed using Python and trained on dermatoscopic skin images collected from Kaggle. Image preprocessing techniques such as resizing, watermark removal and segmentation were applied to enhance model accuracy. A web-based application was also developed using Python, allowing users to upload an image and obtain the predicted disease class along with the segmented lesion image on the results page. This project highlights the application of deep learning in medical image analysis and supports early diagnosis of skin diseases.
Ankitha Thyagarajan's Contact Information
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